Expand run_all pipeline and docs

docs/README.md

@@ -15,7 +15,8 @@ Conventions:
 
 Tools:
 - `example/diagnose_ks.py` for per-feature KS + CDF plots.
-- `example/run_all_full.py` for one-command full pipeline + diagnostics.
+- `example/run_all.py` for one-command full pipeline (train/export/eval/postprocess/diagnostics).
+- `example/run_all_full.py` legacy full pipeline runner.
 - `example/filtered_metrics.py` for filtered KS after removing collapsed/outlier features.
 - `example/ranked_ks.py` for ranked KS table + cumulative avg_ks if removing top features.
 - `example/evaluate_generated.py` for full-reference metrics (now supports glob over all train*.csv.gz).

example/run_all.py

@@ -20,14 +20,18 @@ def run(cmd):
 
 
 def parse_args():
-    parser = argparse.ArgumentParser(description="Run prepare -> train -> export -> evaluate.")
+    parser = argparse.ArgumentParser(description="Run full pipeline end-to-end.")
     base_dir = Path(__file__).resolve().parent
     parser.add_argument("--config", default=str(base_dir / "config.json"))
     parser.add_argument("--device", default="auto", help="cpu, cuda, or auto")
+    parser.add_argument("--reference", default="", help="override reference glob (train*.csv.gz)")
     parser.add_argument("--skip-prepare", action="store_true")
     parser.add_argument("--skip-train", action="store_true")
     parser.add_argument("--skip-export", action="store_true")
     parser.add_argument("--skip-eval", action="store_true")
+    parser.add_argument("--skip-postprocess", action="store_true")
+    parser.add_argument("--skip-post-eval", action="store_true")
+    parser.add_argument("--skip-diagnostics", action="store_true")
     return parser.parse_args()
 
 
@@ -79,14 +83,50 @@ def main():
                 "--use-ema",
             ]
         )
+    ref = args.reference or cfg.get("data_glob") or cfg.get("data_path") or ""
     if not args.skip_eval:
-        ref = cfg.get("data_glob") or cfg.get("data_path") or ""
         if ref:
             run([sys.executable, str(base_dir / "evaluate_generated.py"), "--reference", str(ref)])
         else:
             run([sys.executable, str(base_dir / "evaluate_generated.py")])
         run([sys.executable, str(base_dir / "summary_metrics.py")])
-        run([sys.executable, str(base_dir / "summary_metrics.py")])
+
+    if not args.skip_postprocess:
+        cmd = [
+            sys.executable,
+            str(base_dir / "postprocess_types.py"),
+            "--generated",
+            str(base_dir / "results" / "generated.csv"),
+            "--config",
+            str(config_path),
+        ]
+        if ref:
+            cmd += ["--reference", str(ref)]
+        run(cmd)
+
+    if not args.skip_post_eval:
+        cmd = [
+            sys.executable,
+            str(base_dir / "evaluate_generated.py"),
+            "--generated",
+            str(base_dir / "results" / "generated_post.csv"),
+            "--out",
+            "results/eval_post.json",
+        ]
+        if ref:
+            cmd += ["--reference", str(ref)]
+        run(cmd)
+
+    if not args.skip_diagnostics:
+        if ref:
+            run([sys.executable, str(base_dir / "diagnose_ks.py"), "--generated", str(base_dir / "results" / "generated_post.csv"), "--reference", str(ref)])
+        run([sys.executable, str(base_dir / "filtered_metrics.py"), "--eval", str(base_dir / "results" / "eval_post.json")])
+        run([sys.executable, str(base_dir / "ranked_ks.py"), "--eval", str(base_dir / "results" / "eval_post.json")])
+        run([sys.executable, str(base_dir / "program_stats.py"), "--config", str(config_path), "--reference", str(ref or config_path)])
+        run([sys.executable, str(base_dir / "controller_stats.py"), "--config", str(config_path), "--reference", str(ref or config_path)])
+        run([sys.executable, str(base_dir / "actuator_stats.py"), "--config", str(config_path), "--reference", str(ref or config_path)])
+        run([sys.executable, str(base_dir / "pv_stats.py"), "--config", str(config_path), "--reference", str(ref or config_path)])
+        run([sys.executable, str(base_dir / "aux_stats.py"), "--config", str(config_path), "--reference", str(ref or config_path)])
 
 
 if __name__ == "__main__":

report.md

@@ -277,8 +277,8 @@ Recent runs (WSL, diagnostic):
 ---
 
 ## 10. Automation / 自动化
-`example/run_all.py` runs all stages with config-driven paths.
+`example/run_all.py` runs prepare/train/export/eval + postprocess + diagnostics in one command.
-`example/run_all_full.py` runs prepare/train/export/eval + KS diagnostics in one command.
+`example/run_all_full.py` legacy full runner.
 `example/run_compare.py` can run a baseline vs temporal config and compute metric deltas.
 
 ---